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Cluster: CGMR078076_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_275155 k141_275155_72 84019 84975 + GT2
CAZyme k141_275155 k141_275155_73 84978 86051 + GT4
CAZyme k141_275155 k141_275155_74 86079 87155 + GT4
NULL(UNKNOWN) k141_275155 k141_275155_75 87145 88236 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_275155 k141_275155_76 88233 89363 + GT4
TC k141_275155 k141_275155_77 89365 89991 + 9.B.18.1.2
pfam k141_275155 k141_275155_78 89988 90644 + PglD_N
pfam k141_275155 k141_275155_79 90687 91898 + DegT_DnrJ_EryC1
TC k141_275155 k141_275155_80 91938 93368 + 1.B.73.1.1
Gene ID: k141_275155_72
Type: CAZyme
Location: 84019 - 84975 (+)
Gene ID: k141_275155_73
Type: CAZyme
Location: 84978 - 86051 (+)
Gene ID: k141_275155_74
Type: CAZyme
Location: 86079 - 87155 (+)
Gene ID: k141_275155_75
Type:
Location: 87145 - 88236 (+)
Gene ID: k141_275155_76
Type: CAZyme
Location: 88233 - 89363 (+)
Gene ID: k141_275155_77
Type: TC
Location: 89365 - 89991 (+)
Gene ID: k141_275155_78
Type: pfam
Location: 89988 - 90644 (+)
Gene ID: k141_275155_79
Type: pfam
Location: 90687 - 91898 (+)
Gene ID: k141_275155_80
Type: TC
Location: 91938 - 93368 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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