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Cluster: CGMR078076_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_350636 k141_350636_20 18837 20219 - 2.A.66.1.36
TC k141_350636 k141_350636_21 20293 21474 - 2.A.6.4.1
TC k141_350636 k141_350636_22 21484 23361 - 2.A.6.4.1
TC k141_350636 k141_350636_23 23488 23817 - 3.A.5.1.1
TC k141_350636 k141_350636_24 24316 25500 + 9.A.40.2.2
NULL(UNKNOWN) k141_350636 k141_350636_25 25620 26114 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_350636 k141_350636_26 26359 29448 + GH23
pfam k141_350636 k141_350636_27 29526 30299 - DUF34_NIF3
TC k141_350636 k141_350636_28 30576 31907 + 2.A.102.4.10
Gene ID: k141_350636_20
Type: TC
Location: 18837 - 20219 (-)
Gene ID: k141_350636_21
Type: TC
Location: 20293 - 21474 (-)
Gene ID: k141_350636_22
Type: TC
Location: 21484 - 23361 (-)
Gene ID: k141_350636_23
Type: TC
Location: 23488 - 23817 (-)
Gene ID: k141_350636_24
Type: TC
Location: 24316 - 25500 (+)
Gene ID: k141_350636_25
Type:
Location: 25620 - 26114 (+)
Gene ID: k141_350636_26
Type: CAZyme
Location: 26359 - 29448 (+)
Gene ID: k141_350636_27
Type: pfam
Location: 29526 - 30299 (-)
Gene ID: k141_350636_28
Type: TC
Location: 30576 - 31907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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