Cluster: CGMR078076_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR078076
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_20172 | k141_20172_8 | 8427 | 9095 | + | GT2 |
| pfam | k141_20172 | k141_20172_9 | 9140 | 10633 | - | Lyase_1 | FumaraseC_C |
| pfam | k141_20172 | k141_20172_10 | 10875 | 11408 | + | DUF2058 |
| TC | k141_20172 | k141_20172_11 | 11478 | 12179 | - | 3.A.1.8.2 |
| TC | k141_20172 | k141_20172_12 | 12222 | 13145 | - | 3.A.1.8.1 |
Gene ID: k141_20172_8
Type: CAZyme
Location: 8427 - 9095 (+)
Type: CAZyme
Location: 8427 - 9095 (+)
Gene ID: k141_20172_9
Type: pfam
Location: 9140 - 10633 (-)
Type: pfam
Location: 9140 - 10633 (-)
Gene ID: k141_20172_10
Type: pfam
Location: 10875 - 11408 (+)
Type: pfam
Location: 10875 - 11408 (+)
Gene ID: k141_20172_11
Type: TC
Location: 11478 - 12179 (-)
Type: TC
Location: 11478 - 12179 (-)
Gene ID: k141_20172_12
Type: TC
Location: 12222 - 13145 (-)
Type: TC
Location: 12222 - 13145 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Moraxellaceae
Genus
Psychrobacter
Species
Psychrobacter sp012847335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.