Cluster: CGMR077911_CGC23
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate: galactan/host glycan
- Genome ID: CGMR077911
- CGC Family ID: CGCFAM_00535
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_34136 | k141_34136_7 | 5554 | 6930 | - | GH177 |
| TC | k141_34136 | k141_34136_8 | 7166 | 8506 | + | 2.A.3.3.20 |
| NULL(UNKNOWN) | k141_34136 | k141_34136_9 | 8605 | 8895 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_34136 | k141_34136_10 | 9166 | 9423 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_34136 | k141_34136_11 | 9595 | 12234 | - | GH63 |
| CAZyme | k141_34136 | k141_34136_12 | 12593 | 13939 | + | GH177 |
| TC | k141_34136 | k141_34136_13 | 14297 | 16006 | - | 8.A.46.1.5 |
| TC | k141_34136 | k141_34136_14 | 16018 | 19029 | - | 1.B.14.6.1 |
| pfam | k141_34136 | k141_34136_15 | 19654 | 20091 | - | DUF4488 |
| CAZyme | k141_34136 | k141_34136_16 | 20309 | 21730 | - | CBM32 |
| pfam | k141_34136 | k141_34136_17 | 21848 | 23044 | - | DUF4959 | DUF5000 | DUF5126 |
| pfam | k141_34136 | k141_34136_18 | 23181 | 25073 | - | SusD_RagB | SusD-like_3 |
| TC | k141_34136 | k141_34136_19 | 25084 | 28308 | - | 1.B.14.6.1 |
| CAZyme | k141_34136 | k141_34136_20 | 28512 | 29876 | - | GH109 |
Gene ID: k141_34136_7
Type: CAZyme
Location: 5554 - 6930 (-)
Type: CAZyme
Location: 5554 - 6930 (-)
Gene ID: k141_34136_8
Type: TC
Location: 7166 - 8506 (+)
Type: TC
Location: 7166 - 8506 (+)
Gene ID: k141_34136_9
Type:
Location: 8605 - 8895 (+)
Type:
Location: 8605 - 8895 (+)
Gene ID: k141_34136_10
Type:
Location: 9166 - 9423 (+)
Type:
Location: 9166 - 9423 (+)
Gene ID: k141_34136_11
Type: CAZyme
Location: 9595 - 12234 (-)
Type: CAZyme
Location: 9595 - 12234 (-)
Gene ID: k141_34136_12
Type: CAZyme
Location: 12593 - 13939 (+)
Type: CAZyme
Location: 12593 - 13939 (+)
Gene ID: k141_34136_13
Type: TC
Location: 14297 - 16006 (-)
Type: TC
Location: 14297 - 16006 (-)
Gene ID: k141_34136_14
Type: TC
Location: 16018 - 19029 (-)
Type: TC
Location: 16018 - 19029 (-)
Gene ID: k141_34136_15
Type: pfam
Location: 19654 - 20091 (-)
Type: pfam
Location: 19654 - 20091 (-)
Gene ID: k141_34136_16
Type: CAZyme
Location: 20309 - 21730 (-)
Type: CAZyme
Location: 20309 - 21730 (-)
Gene ID: k141_34136_17
Type: pfam
Location: 21848 - 23044 (-)
Type: pfam
Location: 21848 - 23044 (-)
Gene ID: k141_34136_18
Type: pfam
Location: 23181 - 25073 (-)
Type: pfam
Location: 23181 - 25073 (-)
Gene ID: k141_34136_19
Type: TC
Location: 25084 - 28308 (-)
Type: TC
Location: 25084 - 28308 (-)
Gene ID: k141_34136_20
Type: CAZyme
Location: 28512 - 29876 (-)
Type: CAZyme
Location: 28512 - 29876 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Arenibacter
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.