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Cluster: CGMR077911_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_183775 k141_183775_9 12554 13525 - GH109
pfam k141_183775 k141_183775_10 13522 14541 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_183775 k141_183775_11 14558 15670 - ADH_zinc_N | AlaDh_PNT_C | ADH_N | Glu_dehyd_C
CAZyme k141_183775 k141_183775_12 15863 17017 - GH179
pfam k141_183775 k141_183775_13 17072 18121 - AP_endonuc_2
TF k141_183775 k141_183775_14 18395 19279 + HTH_AraC
TC k141_183775 k141_183775_15 19598 20896 + 2.A.1.77.2
pfam k141_183775 k141_183775_16 20992 21828 + AP_endonuc_2
pfam k141_183775 k141_183775_17 21929 23041 + ThuA
TC k141_183775 k141_183775_18 23702 24943 + 1.B.6.1.14
Gene ID: k141_183775_9
Type: CAZyme
Location: 12554 - 13525 (-)
Gene ID: k141_183775_10
Type: pfam
Location: 13522 - 14541 (-)
Gene ID: k141_183775_11
Type: pfam
Location: 14558 - 15670 (-)
Gene ID: k141_183775_12
Type: CAZyme
Location: 15863 - 17017 (-)
Gene ID: k141_183775_13
Type: pfam
Location: 17072 - 18121 (-)
Gene ID: k141_183775_14
Type: TF
Location: 18395 - 19279 (+)
Gene ID: k141_183775_15
Type: TC
Location: 19598 - 20896 (+)
Gene ID: k141_183775_16
Type: pfam
Location: 20992 - 21828 (+)
Gene ID: k141_183775_17
Type: pfam
Location: 21929 - 23041 (+)
Gene ID: k141_183775_18
Type: TC
Location: 23702 - 24943 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Flavobacteriales
→
Family
Flavobacteriaceae
→
Genus
Arenibacter
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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