Cluster: CGMR077736_CGC7
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR077736
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_19615 | k141_19615_89 | 93040 | 94863 | - | GH13_30 |
| STP | k141_19615 | k141_19615_90 | 95703 | 96449 | - | STAS |
| STP | k141_19615 | k141_19615_91 | 96528 | 98873 | - | GAF | SpoIIE |
| TC | k141_19615 | k141_19615_92 | 99617 | 100645 | - | 3.A.1.5.36 |
| TC | k141_19615 | k141_19615_93 | 100646 | 101737 | - | 3.A.1.5.34 |
| TC | k141_19615 | k141_19615_94 | 101740 | 102675 | - | 3.A.1.5.11 |
| TC | k141_19615 | k141_19615_95 | 102690 | 103727 | - | 3.A.1.5.37 |
| TC | k141_19615 | k141_19615_96 | 103884 | 105560 | - | 3.A.1.5.35 |
Gene ID: k141_19615_89
Type: CAZyme
Location: 93040 - 94863 (-)
Type: CAZyme
Location: 93040 - 94863 (-)
Gene ID: k141_19615_90
Type: STP
Location: 95703 - 96449 (-)
Type: STP
Location: 95703 - 96449 (-)
Gene ID: k141_19615_91
Type: STP
Location: 96528 - 98873 (-)
Type: STP
Location: 96528 - 98873 (-)
Gene ID: k141_19615_92
Type: TC
Location: 99617 - 100645 (-)
Type: TC
Location: 99617 - 100645 (-)
Gene ID: k141_19615_93
Type: TC
Location: 100646 - 101737 (-)
Type: TC
Location: 100646 - 101737 (-)
Gene ID: k141_19615_94
Type: TC
Location: 101740 - 102675 (-)
Type: TC
Location: 101740 - 102675 (-)
Gene ID: k141_19615_95
Type: TC
Location: 102690 - 103727 (-)
Type: TC
Location: 102690 - 103727 (-)
Gene ID: k141_19615_96
Type: TC
Location: 103884 - 105560 (-)
Type: TC
Location: 103884 - 105560 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.