Cluster: CGMR077736_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR077736
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_32104 | k141_32104_87 | 90134 | 90625 | - | 9.B.97.6.3 |
| TC | k141_32104 | k141_32104_88 | 90832 | 91599 | - | 3.A.1.103.1 |
| TC | k141_32104 | k141_32104_89 | 91611 | 92456 | - | 3.A.1.103.6 |
| CAZyme | k141_32104 | k141_32104_90 | 92617 | 93588 | + | GT81 |
| CAZyme | k141_32104 | k141_32104_91 | 93595 | 94563 | + | GT2 |
| TC | k141_32104 | k141_32104_92 | 94547 | 96958 | + | 9.B.144.1.5 |
Gene ID: k141_32104_87
Type: TC
Location: 90134 - 90625 (-)
Type: TC
Location: 90134 - 90625 (-)
Gene ID: k141_32104_88
Type: TC
Location: 90832 - 91599 (-)
Type: TC
Location: 90832 - 91599 (-)
Gene ID: k141_32104_89
Type: TC
Location: 91611 - 92456 (-)
Type: TC
Location: 91611 - 92456 (-)
Gene ID: k141_32104_90
Type: CAZyme
Location: 92617 - 93588 (+)
Type: CAZyme
Location: 92617 - 93588 (+)
Gene ID: k141_32104_91
Type: CAZyme
Location: 93595 - 94563 (+)
Type: CAZyme
Location: 93595 - 94563 (+)
Gene ID: k141_32104_92
Type: TC
Location: 94547 - 96958 (+)
Type: TC
Location: 94547 - 96958 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.