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Cluster: CGMR077736_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43283 k141_43283_29 28702 29469 - 1.A.23.4.2
TC k141_43283 k141_43283_30 29804 30598 - 3.A.1.34.1
TC k141_43283 k141_43283_31 30591 31514 - 3.A.1.34.1
TC k141_43283 k141_43283_32 31704 32684 - 3.A.1.34.1
NULL(UNKNOWN) k141_43283 k141_43283_33 32845 33630 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_43283 k141_43283_34 33880 35283 - tRNA-synt_2 | tRNA_anti-codon
TC k141_43283 k141_43283_35 35465 36028 - 4.A.1.2.6
peptidase k141_43283 k141_43283_36 36275 37174 + S09.UPW
NULL(UNKNOWN) k141_43283 k141_43283_37 37222 37542 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_43283 k141_43283_38 37664 40024 + 9.A.8.1.6
TC k141_43283 k141_43283_39 40149 41345 + 2.A.1.2.18
CAZyme k141_43283 k141_43283_40 41499 42875 + GH13_20
Gene ID: k141_43283_29
Type: TC
Location: 28702 - 29469 (-)
Gene ID: k141_43283_30
Type: TC
Location: 29804 - 30598 (-)
Gene ID: k141_43283_31
Type: TC
Location: 30591 - 31514 (-)
Gene ID: k141_43283_32
Type: TC
Location: 31704 - 32684 (-)
Gene ID: k141_43283_33
Type:
Location: 32845 - 33630 (-)
Gene ID: k141_43283_34
Type: pfam
Location: 33880 - 35283 (-)
Gene ID: k141_43283_35
Type: TC
Location: 35465 - 36028 (-)
Gene ID: k141_43283_36
Type: peptidase
Location: 36275 - 37174 (+)
Gene ID: k141_43283_37
Type:
Location: 37222 - 37542 (+)
Gene ID: k141_43283_38
Type: TC
Location: 37664 - 40024 (+)
Gene ID: k141_43283_39
Type: TC
Location: 40149 - 41345 (+)
Gene ID: k141_43283_40
Type: CAZyme
Location: 41499 - 42875 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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