Cluster: CGMR077674_CGC62
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR077674
- CGC Family ID: CGCFAM_01288
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_151107 | k141_151107_2 | 1292 | 4771 | + | 1.B.14.6.1 |
| pfam | k141_151107 | k141_151107_3 | 4806 | 6278 | + | SusD_RagB | SusD-like_3 |
| CAZyme | k141_151107 | k141_151107_4 | 6367 | 7554 | + | GH16_24 |
| pfam | k141_151107 | k141_151107_5 | 7556 | 9127 | + | DUF4832 | DUF4874 |
| pfam | k141_151107 | k141_151107_6 | 9179 | 10090 | + | Glutaminase |
| CAZyme | k141_151107 | k141_151107_7 | 10151 | 12304 | + | GH89 |
| CAZyme | k141_151107 | k141_151107_8 | 12315 | 13910 | + | GH31_19 |
Gene ID: k141_151107_2
Type: TC
Location: 1292 - 4771 (+)
Type: TC
Location: 1292 - 4771 (+)
Gene ID: k141_151107_3
Type: pfam
Location: 4806 - 6278 (+)
Type: pfam
Location: 4806 - 6278 (+)
Gene ID: k141_151107_4
Type: CAZyme
Location: 6367 - 7554 (+)
Type: CAZyme
Location: 6367 - 7554 (+)
Gene ID: k141_151107_5
Type: pfam
Location: 7556 - 9127 (+)
Type: pfam
Location: 7556 - 9127 (+)
Gene ID: k141_151107_6
Type: pfam
Location: 9179 - 10090 (+)
Type: pfam
Location: 9179 - 10090 (+)
Gene ID: k141_151107_7
Type: CAZyme
Location: 10151 - 12304 (+)
Type: CAZyme
Location: 10151 - 12304 (+)
Gene ID: k141_151107_8
Type: CAZyme
Location: 12315 - 13910 (+)
Type: CAZyme
Location: 12315 - 13910 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides acidifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_151107_2 | vegetarian > omnivore | 1.04911 | 0.00012 |
| k141_151107_5 | vegetarian > omnivore | 1.04942 | 0.00012 |