Cluster: CGMR077674_CGC32
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate: galactan/pectin/host glycan
- Genome ID: CGMR077674
- CGC Family ID: CGCFAM_00485
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_40310 | k141_40310_8 | 8454 | 10550 | + | 2.A.21.9.1 |
| CAZyme | k141_40310 | k141_40310_9 | 11246 | 13546 | - | GH92 |
| CAZyme | k141_40310 | k141_40310_10 | 13550 | 15859 | - | GH92 |
| pfam | k141_40310 | k141_40310_11 | 16070 | 17638 | - | SusD_RagB | SusD-like_3 |
| TC | k141_40310 | k141_40310_12 | 17663 | 21022 | - | 1.B.14.6.1 |
| STP | k141_40310 | k141_40310_13 | 21173 | 22147 | - | FecR |
| TF | k141_40310 | k141_40310_14 | 22218 | 22757 | - | GerE |
| TC | k141_40310 | k141_40310_15 | 22794 | 24179 | + | 2.A.23.1.1 |
Gene ID: k141_40310_8
Type: TC
Location: 8454 - 10550 (+)
Type: TC
Location: 8454 - 10550 (+)
Gene ID: k141_40310_9
Type: CAZyme
Location: 11246 - 13546 (-)
Type: CAZyme
Location: 11246 - 13546 (-)
Gene ID: k141_40310_10
Type: CAZyme
Location: 13550 - 15859 (-)
Type: CAZyme
Location: 13550 - 15859 (-)
Gene ID: k141_40310_11
Type: pfam
Location: 16070 - 17638 (-)
Type: pfam
Location: 16070 - 17638 (-)
Gene ID: k141_40310_12
Type: TC
Location: 17663 - 21022 (-)
Type: TC
Location: 17663 - 21022 (-)
Gene ID: k141_40310_13
Type: STP
Location: 21173 - 22147 (-)
Type: STP
Location: 21173 - 22147 (-)
Gene ID: k141_40310_14
Type: TF
Location: 22218 - 22757 (-)
Type: TF
Location: 22218 - 22757 (-)
Gene ID: k141_40310_15
Type: TC
Location: 22794 - 24179 (+)
Type: TC
Location: 22794 - 24179 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides acidifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.