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Cluster: CGMR077674_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_216505 k141_216505_30 45885 47393 + GH136
pfam k141_216505 k141_216505_31 47439 50075 + MutS_V | MutS_I | MutS_II | MutS_IV | MutS_III
CAZyme k141_216505 k141_216505_32 50124 53378 + GH106
pfam k141_216505 k141_216505_33 53425 54858 - Arabinose_Iso_C
CAZyme k141_216505 k141_216505_34 54871 57663 - CBM67 | GH78
CAZyme k141_216505 k141_216505_35 57677 60760 - GH106
TC k141_216505 k141_216505_36 60853 62379 - 8.A.46.1.3
TC k141_216505 k141_216505_37 62415 65525 - 1.B.14.6.1
Gene ID: k141_216505_30
Type: CAZyme
Location: 45885 - 47393 (+)
Gene ID: k141_216505_31
Type: pfam
Location: 47439 - 50075 (+)
Gene ID: k141_216505_32
Type: CAZyme
Location: 50124 - 53378 (+)
Gene ID: k141_216505_33
Type: pfam
Location: 53425 - 54858 (-)
Gene ID: k141_216505_34
Type: CAZyme
Location: 54871 - 57663 (-)
Gene ID: k141_216505_35
Type: CAZyme
Location: 57677 - 60760 (-)
Gene ID: k141_216505_36
Type: TC
Location: 60853 - 62379 (-)
Gene ID: k141_216505_37
Type: TC
Location: 62415 - 65525 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_216505_36 vegetarian > omnivore 1.09255 0.00012

🧭 Explore Read Mapping of CGC

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