Cluster: CGMR077674_CGC22
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR077674
- CGC Family ID: CGCFAM_02082
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_134317 | k141_134317_4 | 3479 | 5806 | + | GH92 |
| CAZyme | k141_134317 | k141_134317_5 | 5822 | 7471 | + | GH156 |
| pfam | k141_134317 | k141_134317_6 | 7563 | 7802 | + | DUF6722 |
| NULL(UNKNOWN) | k141_134317 | k141_134317_7 | 7808 | 7918 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_134317 | k141_134317_8 | 8087 | 9556 | - | GH28 |
| CAZyme | k141_134317 | k141_134317_9 | 9571 | 12453 | - | GH106 |
| CAZyme | k141_134317 | k141_134317_10 | 12468 | 13220 | - | GH28 |
| CAZyme | k141_134317 | k141_134317_11 | 13238 | 14731 | - | GH28 |
| pfam | k141_134317 | k141_134317_12 | 14886 | 16358 | - | PD40 | PD40 |
| pfam | k141_134317 | k141_134317_13 | 16360 | 18195 | - | DUF6057 |
| TC | k141_134317 | k141_134317_14 | 18289 | 20253 | - | 8.A.46.1.6 |
| TC | k141_134317 | k141_134317_15 | 20278 | 23460 | - | 1.B.14.6.1 |
Gene ID: k141_134317_4
Type: CAZyme
Location: 3479 - 5806 (+)
Type: CAZyme
Location: 3479 - 5806 (+)
Gene ID: k141_134317_5
Type: CAZyme
Location: 5822 - 7471 (+)
Type: CAZyme
Location: 5822 - 7471 (+)
Gene ID: k141_134317_6
Type: pfam
Location: 7563 - 7802 (+)
Type: pfam
Location: 7563 - 7802 (+)
Gene ID: k141_134317_7
Type:
Location: 7808 - 7918 (+)
Type:
Location: 7808 - 7918 (+)
Gene ID: k141_134317_8
Type: CAZyme
Location: 8087 - 9556 (-)
Type: CAZyme
Location: 8087 - 9556 (-)
Gene ID: k141_134317_9
Type: CAZyme
Location: 9571 - 12453 (-)
Type: CAZyme
Location: 9571 - 12453 (-)
Gene ID: k141_134317_10
Type: CAZyme
Location: 12468 - 13220 (-)
Type: CAZyme
Location: 12468 - 13220 (-)
Gene ID: k141_134317_11
Type: CAZyme
Location: 13238 - 14731 (-)
Type: CAZyme
Location: 13238 - 14731 (-)
Gene ID: k141_134317_12
Type: pfam
Location: 14886 - 16358 (-)
Type: pfam
Location: 14886 - 16358 (-)
Gene ID: k141_134317_13
Type: pfam
Location: 16360 - 18195 (-)
Type: pfam
Location: 16360 - 18195 (-)
Gene ID: k141_134317_14
Type: TC
Location: 18289 - 20253 (-)
Type: TC
Location: 18289 - 20253 (-)
Gene ID: k141_134317_15
Type: TC
Location: 20278 - 23460 (-)
Type: TC
Location: 20278 - 23460 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides acidifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_134317_5 | vegetarian > omnivore | 1.12335 | 0.00012 |
| k141_134317_5 | vegetarian > vegan | 1.21915 | 0.01033 |
| k141_134317_8 | vegetarian > omnivore | 1.22203 | 0.00012 |
| k141_134317_9 | vegetarian > omnivore | 1.39642 | 0.00012 |
| k141_134317_11 | vegetarian > omnivore | 1.92321 | 0.00012 |
| k141_134317_11 | vegetarian > vegan | 1.19523 | 0.01033 |