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Cluster: CGMR077674_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_56893 k141_56893_20 22513 24993 + 9.A.8.1.6
NULL(UNKNOWN) k141_56893 k141_56893_21 25012 25182 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_56893 k141_56893_22 25252 26349 + GH33
CAZyme k141_56893 k141_56893_23 26400 27551 + GT4
pfam k141_56893 k141_56893_24 27576 28613 + Glyco_trans_1_4
CAZyme k141_56893 k141_56893_25 28923 30014 - GT4
pfam k141_56893 k141_56893_26 30011 31087 - Radical_SAM | SPASM
CAZyme k141_56893 k141_56893_27 31176 32357 - GT4
NULL(UNKNOWN) k141_56893 k141_56893_28 32363 33604 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_56893 k141_56893_29 33646 34698 - 9.B.97.1.9
CAZyme k141_56893 k141_56893_30 34863 35867 - GT100
Gene ID: k141_56893_20
Type: TC
Location: 22513 - 24993 (+)
Gene ID: k141_56893_21
Type:
Location: 25012 - 25182 (+)
Gene ID: k141_56893_22
Type: CAZyme
Location: 25252 - 26349 (+)
Gene ID: k141_56893_23
Type: CAZyme
Location: 26400 - 27551 (+)
Gene ID: k141_56893_24
Type: pfam
Location: 27576 - 28613 (+)
Gene ID: k141_56893_25
Type: CAZyme
Location: 28923 - 30014 (-)
Gene ID: k141_56893_26
Type: pfam
Location: 30011 - 31087 (-)
Gene ID: k141_56893_27
Type: CAZyme
Location: 31176 - 32357 (-)
Gene ID: k141_56893_28
Type:
Location: 32363 - 33604 (-)
Gene ID: k141_56893_29
Type: TC
Location: 33646 - 34698 (-)
Gene ID: k141_56893_30
Type: CAZyme
Location: 34863 - 35867 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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