Cluster: CGMR077674_CGC10
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR077674
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_119992 | k141_119992_46 | 53539 | 55806 | + | 2.A.37.1.8 |
| pfam | k141_119992 | k141_119992_47 | 55862 | 56626 | + | CTP_transf_3 | NTP_transf_3 |
| pfam | k141_119992 | k141_119992_48 | 56601 | 57428 | - | DUF6057 |
| TC | k141_119992 | k141_119992_49 | 57722 | 59626 | - | 2.A.9.3.1 |
| peptidase | k141_119992 | k141_119992_50 | 59635 | 61242 | - | C26.964 |
| CAZyme | k141_119992 | k141_119992_51 | 61468 | 63321 | - | GH2 |
| CAZyme | k141_119992 | k141_119992_52 | 63326 | 65134 | - | GH2 |
| CAZyme | k141_119992 | k141_119992_53 | 65174 | 68134 | - | GH43_3 |
| TF | k141_119992 | k141_119992_54 | 68316 | 72272 | + | HTH_AraC |
| CAZyme | k141_119992 | k141_119992_55 | 72600 | 74615 | - | GH127 |
| NULL(UNKNOWN) | k141_119992 | k141_119992_56 | 74663 | 74863 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_119992 | k141_119992_57 | 74790 | 75020 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_119992 | k141_119992_58 | 75023 | 76345 | - | GH177 |
Gene ID: k141_119992_46
Type: TC
Location: 53539 - 55806 (+)
Type: TC
Location: 53539 - 55806 (+)
Gene ID: k141_119992_47
Type: pfam
Location: 55862 - 56626 (+)
Type: pfam
Location: 55862 - 56626 (+)
Gene ID: k141_119992_48
Type: pfam
Location: 56601 - 57428 (-)
Type: pfam
Location: 56601 - 57428 (-)
Gene ID: k141_119992_49
Type: TC
Location: 57722 - 59626 (-)
Type: TC
Location: 57722 - 59626 (-)
Gene ID: k141_119992_50
Type: peptidase
Location: 59635 - 61242 (-)
Type: peptidase
Location: 59635 - 61242 (-)
Gene ID: k141_119992_51
Type: CAZyme
Location: 61468 - 63321 (-)
Type: CAZyme
Location: 61468 - 63321 (-)
Gene ID: k141_119992_52
Type: CAZyme
Location: 63326 - 65134 (-)
Type: CAZyme
Location: 63326 - 65134 (-)
Gene ID: k141_119992_53
Type: CAZyme
Location: 65174 - 68134 (-)
Type: CAZyme
Location: 65174 - 68134 (-)
Gene ID: k141_119992_54
Type: TF
Location: 68316 - 72272 (+)
Type: TF
Location: 68316 - 72272 (+)
Gene ID: k141_119992_55
Type: CAZyme
Location: 72600 - 74615 (-)
Type: CAZyme
Location: 72600 - 74615 (-)
Gene ID: k141_119992_56
Type:
Location: 74663 - 74863 (+)
Type:
Location: 74663 - 74863 (+)
Gene ID: k141_119992_57
Type:
Location: 74790 - 75020 (-)
Type:
Location: 74790 - 75020 (-)
Gene ID: k141_119992_58
Type: CAZyme
Location: 75023 - 76345 (-)
Type: CAZyme
Location: 75023 - 76345 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides acidifaciens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.