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Cluster: CGMR077674_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_664 k141_664_2 1502 2617 - GH105
CAZyme k141_664 k141_664_3 2636 3910 - GH154
TC k141_664 k141_664_4 3926 5599 - 8.A.46.1.6
TC k141_664 k141_664_5 5621 8653 - 1.B.14.6.1
TF k141_664 k141_664_6 8868 12989 - HTH_AraC
pfam k141_664 k141_664_7 13091 13597 - Flavin_Reduct
TC k141_664 k141_664_8 13758 15158 + 2.A.25.1.5
peptidase k141_664 k141_664_9 15159 16385 - M16.UPB
pfam k141_664 k141_664_10 16532 18199 - PRK
TC k141_664 k141_664_11 18282 19970 + 2.A.58.2.2
Gene ID: k141_664_2
Type: CAZyme
Location: 1502 - 2617 (-)
Gene ID: k141_664_3
Type: CAZyme
Location: 2636 - 3910 (-)
Gene ID: k141_664_4
Type: TC
Location: 3926 - 5599 (-)
Gene ID: k141_664_5
Type: TC
Location: 5621 - 8653 (-)
Gene ID: k141_664_6
Type: TF
Location: 8868 - 12989 (-)
Gene ID: k141_664_7
Type: pfam
Location: 13091 - 13597 (-)
Gene ID: k141_664_8
Type: TC
Location: 13758 - 15158 (+)
Gene ID: k141_664_9
Type: peptidase
Location: 15159 - 16385 (-)
Gene ID: k141_664_10
Type: pfam
Location: 16532 - 18199 (-)
Gene ID: k141_664_11
Type: TC
Location: 18282 - 19970 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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