Cluster: CGMR077065_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR077065
- CGC Family ID: CGCFAM_08435
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_4906 | k141_4906_3 | 1639 | 3228 | - | 2.A.66.4.3 |
| pfam | k141_4906 | k141_4906_4 | 3259 | 3768 | - | SecB |
| pfam | k141_4906 | k141_4906_5 | 4006 | 4653 | + | Tim44 |
| CAZyme | k141_4906 | k141_4906_6 | 4795 | 6138 | + | GH102 |
Gene ID: k141_4906_3
Type: TC
Location: 1639 - 3228 (-)
Type: TC
Location: 1639 - 3228 (-)
Gene ID: k141_4906_4
Type: pfam
Location: 3259 - 3768 (-)
Type: pfam
Location: 3259 - 3768 (-)
Gene ID: k141_4906_5
Type: pfam
Location: 4006 - 4653 (+)
Type: pfam
Location: 4006 - 4653 (+)
Gene ID: k141_4906_6
Type: CAZyme
Location: 4795 - 6138 (+)
Type: CAZyme
Location: 4795 - 6138 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas sp003355005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.