Cluster: CGMR077065_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR077065
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_4379 | k141_4379_1 | 1 | 1047 | - | GH2 |
| pfam | k141_4379 | k141_4379_2 | 1068 | 2237 | - | AP_endonuc_2 | UxuA |
| peptidase | k141_4379 | k141_4379_3 | 2241 | 3563 | - | S09.UPW |
| TC | k141_4379 | k141_4379_4 | 3623 | 5932 | - | 1.B.14.8.1 |
| TF | k141_4379 | k141_4379_5 | 6084 | 6863 | + | GntR |
| CAZyme | k141_4379 | k141_4379_6 | 6930 | 9311 | - | GH31_2 |
| TC | k141_4379 | k141_4379_7 | 9308 | 9973 | - | 2.A.1.14.2 |
Gene ID: k141_4379_1
Type: CAZyme
Location: 1 - 1047 (-)
Type: CAZyme
Location: 1 - 1047 (-)
Gene ID: k141_4379_2
Type: pfam
Location: 1068 - 2237 (-)
Type: pfam
Location: 1068 - 2237 (-)
Gene ID: k141_4379_3
Type: peptidase
Location: 2241 - 3563 (-)
Type: peptidase
Location: 2241 - 3563 (-)
Gene ID: k141_4379_4
Type: TC
Location: 3623 - 5932 (-)
Type: TC
Location: 3623 - 5932 (-)
Gene ID: k141_4379_5
Type: TF
Location: 6084 - 6863 (+)
Type: TF
Location: 6084 - 6863 (+)
Gene ID: k141_4379_6
Type: CAZyme
Location: 6930 - 9311 (-)
Type: CAZyme
Location: 6930 - 9311 (-)
Gene ID: k141_4379_7
Type: TC
Location: 9308 - 9973 (-)
Type: TC
Location: 9308 - 9973 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas sp003355005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.