Cluster: CGMR077065_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR077065
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10232 | k141_10232_6 | 3563 | 5104 | - | 2.A.1.3.2 |
| TC | k141_10232 | k141_10232_7 | 5120 | 6331 | - | 8.A.1.1.2 |
| TC | k141_10232 | k141_10232_8 | 6328 | 7737 | - | 2.A.6.2.44 |
| TF | k141_10232 | k141_10232_9 | 7734 | 8237 | - | MarR |
| STP | k141_10232 | k141_10232_10 | 8360 | 10849 | + | Pyr_redox_2 |
| CAZyme | k141_10232 | k141_10232_11 | 10846 | 11895 | + | GT2 |
Gene ID: k141_10232_6
Type: TC
Location: 3563 - 5104 (-)
Type: TC
Location: 3563 - 5104 (-)
Gene ID: k141_10232_7
Type: TC
Location: 5120 - 6331 (-)
Type: TC
Location: 5120 - 6331 (-)
Gene ID: k141_10232_8
Type: TC
Location: 6328 - 7737 (-)
Type: TC
Location: 6328 - 7737 (-)
Gene ID: k141_10232_9
Type: TF
Location: 7734 - 8237 (-)
Type: TF
Location: 7734 - 8237 (-)
Gene ID: k141_10232_10
Type: STP
Location: 8360 - 10849 (+)
Type: STP
Location: 8360 - 10849 (+)
Gene ID: k141_10232_11
Type: CAZyme
Location: 10846 - 11895 (+)
Type: CAZyme
Location: 10846 - 11895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Species
Sphingomonas sp003355005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.