Cluster: CGMR076943_CGC37
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076943
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_181991 | k141_181991_3 | 2203 | 3435 | + | 2.A.20.1.6 |
| NULL(UNKNOWN) | k141_181991 | k141_181991_4 | 3432 | 3683 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_181991 | k141_181991_5 | 3805 | 5280 | + | 2.A.40.7.2 |
| TC | k141_181991 | k141_181991_6 | 5376 | 6653 | + | 2.A.55.3.4 |
| pfam | k141_181991 | k141_181991_7 | 6700 | 7215 | - | GtrA_DPMS_TM |
| CAZyme | k141_181991 | k141_181991_8 | 7403 | 8149 | + | GT2 |
Gene ID: k141_181991_3
Type: TC
Location: 2203 - 3435 (+)
Type: TC
Location: 2203 - 3435 (+)
Gene ID: k141_181991_4
Type:
Location: 3432 - 3683 (+)
Type:
Location: 3432 - 3683 (+)
Gene ID: k141_181991_5
Type: TC
Location: 3805 - 5280 (+)
Type: TC
Location: 3805 - 5280 (+)
Gene ID: k141_181991_6
Type: TC
Location: 5376 - 6653 (+)
Type: TC
Location: 5376 - 6653 (+)
Gene ID: k141_181991_7
Type: pfam
Location: 6700 - 7215 (-)
Type: pfam
Location: 6700 - 7215 (-)
Gene ID: k141_181991_8
Type: CAZyme
Location: 7403 - 8149 (+)
Type: CAZyme
Location: 7403 - 8149 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Microbacteriaceae
Genus
Clavibacter
Species
Clavibacter sepedonicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.