Cluster: CGMR076943_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076943
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_148787 | k141_148787_16 | 17221 | 19377 | - | 3.A.1.14.12 |
| TC | k141_148787 | k141_148787_17 | 19392 | 20381 | - | 3.A.1.14.12 |
| TC | k141_148787 | k141_148787_18 | 20378 | 21289 | - | 3.A.1.14.12 |
| NULL(UNKNOWN) | k141_148787 | k141_148787_19 | 21341 | 22111 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_148787 | k141_148787_20 | 22330 | 23358 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_148787 | k141_148787_21 | 23355 | 24329 | - | GH18 |
Gene ID: k141_148787_16
Type: TC
Location: 17221 - 19377 (-)
Type: TC
Location: 17221 - 19377 (-)
Gene ID: k141_148787_17
Type: TC
Location: 19392 - 20381 (-)
Type: TC
Location: 19392 - 20381 (-)
Gene ID: k141_148787_18
Type: TC
Location: 20378 - 21289 (-)
Type: TC
Location: 20378 - 21289 (-)
Gene ID: k141_148787_19
Type:
Location: 21341 - 22111 (-)
Type:
Location: 21341 - 22111 (-)
Gene ID: k141_148787_20
Type:
Location: 22330 - 23358 (-)
Type:
Location: 22330 - 23358 (-)
Gene ID: k141_148787_21
Type: CAZyme
Location: 23355 - 24329 (-)
Type: CAZyme
Location: 23355 - 24329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Microbacteriaceae
Genus
Clavibacter
Species
Clavibacter sepedonicus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.