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Cluster: CGMR076904_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_72008 k141_72008_23 29470 31749 + 1.B.14.8.2
NULL(UNKNOWN) k141_72008 k141_72008_24 31883 32860 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_72008 k141_72008_25 33114 33485 + 3.D.1.8.1
TC k141_72008 k141_72008_26 33476 34090 + 3.D.1.6.1
TC k141_72008 k141_72008_27 34109 35734 + 3.D.1.5.1
TC k141_72008 k141_72008_28 35775 36854 + 3.D.1.5.1
TC k141_72008 k141_72008_29 36880 38382 + 3.A.2.1.2
pfam k141_72008 k141_72008_30 38401 38637 + ATP-synt_DE_N
TC k141_72008 k141_72008_31 38652 40004 + 3.A.2.1.7
TC k141_72008 k141_72008_32 40050 40307 + 3.A.2.1.6
pfam k141_72008 k141_72008_33 40342 40836 + ATP-synt_B | Mt_ATP-synt_B
pfam k141_72008 k141_72008_34 40841 41386 + OSCP
TC k141_72008 k141_72008_35 41390 42979 + 3.A.2.1.3
TC k141_72008 k141_72008_36 42989 43876 + 3.A.2.1.1
STP k141_72008 k141_72008_37 43959 44552 + Fer4 | Fer4
TC k141_72008 k141_72008_38 44617 45144 + 3.D.1.5.1
TC k141_72008 k141_72008_39 45151 45462 + 3.D.1.2.1
TC k141_72008 k141_72008_40 45466 47451 + 3.D.1.2.1
TC k141_72008 k141_72008_41 47487 49004 + 3.D.1.2.1
TC k141_72008 k141_72008_42 49034 50485 + 3.D.1.2.1
pfam k141_72008 k141_72008_43 50626 51384 + TM1586_NiRdase
NULL(UNKNOWN) k141_72008 k141_72008_44 51851 52477 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_72008 k141_72008_45 52819 54252 - GH57
CAZyme k141_72008 k141_72008_46 54330 55595 - GT4
CAZyme k141_72008 k141_72008_47 55608 57572 - GH133
Gene ID: k141_72008_23
Type: TC
Location: 29470 - 31749 (+)
Gene ID: k141_72008_24
Type:
Location: 31883 - 32860 (+)
Gene ID: k141_72008_25
Type: TC
Location: 33114 - 33485 (+)
Gene ID: k141_72008_26
Type: TC
Location: 33476 - 34090 (+)
Gene ID: k141_72008_27
Type: TC
Location: 34109 - 35734 (+)
Gene ID: k141_72008_28
Type: TC
Location: 35775 - 36854 (+)
Gene ID: k141_72008_29
Type: TC
Location: 36880 - 38382 (+)
Gene ID: k141_72008_30
Type: pfam
Location: 38401 - 38637 (+)
Gene ID: k141_72008_31
Type: TC
Location: 38652 - 40004 (+)
Gene ID: k141_72008_32
Type: TC
Location: 40050 - 40307 (+)
Gene ID: k141_72008_33
Type: pfam
Location: 40342 - 40836 (+)
Gene ID: k141_72008_34
Type: pfam
Location: 40841 - 41386 (+)
Gene ID: k141_72008_35
Type: TC
Location: 41390 - 42979 (+)
Gene ID: k141_72008_36
Type: TC
Location: 42989 - 43876 (+)
Gene ID: k141_72008_37
Type: STP
Location: 43959 - 44552 (+)
Gene ID: k141_72008_38
Type: TC
Location: 44617 - 45144 (+)
Gene ID: k141_72008_39
Type: TC
Location: 45151 - 45462 (+)
Gene ID: k141_72008_40
Type: TC
Location: 45466 - 47451 (+)
Gene ID: k141_72008_41
Type: TC
Location: 47487 - 49004 (+)
Gene ID: k141_72008_42
Type: TC
Location: 49034 - 50485 (+)
Gene ID: k141_72008_43
Type: pfam
Location: 50626 - 51384 (+)
Gene ID: k141_72008_44
Type:
Location: 51851 - 52477 (+)
Gene ID: k141_72008_45
Type: CAZyme
Location: 52819 - 54252 (-)
Gene ID: k141_72008_46
Type: CAZyme
Location: 54330 - 55595 (-)
Gene ID: k141_72008_47
Type: CAZyme
Location: 55608 - 57572 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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