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Cluster: CGMR076789_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42268 k141_42268_166 181175 181726 + 1.B.6.2.20
pfam k141_42268 k141_42268_167 181860 182624 - YdjC
CAZyme k141_42268 k141_42268_168 182661 184016 - GH4
TF k141_42268 k141_42268_169 184177 185034 - HTH_AraC | HTH_AraC
TC k141_42268 k141_42268_170 185036 185383 - 4.A.3.2.1
TC k141_42268 k141_42268_171 185445 186803 - 4.A.3.2.7
TC k141_42268 k141_42268_172 186898 187224 - 4.A.3.2.1
TC k141_42268 k141_42268_173 187678 188637 + 3.A.1.14.8
TC k141_42268 k141_42268_174 188647 189609 + 3.A.1.14.2
pfam k141_42268 k141_42268_175 189596 190603 + ABC-3 | FecCD
TC k141_42268 k141_42268_176 190605 191360 + 3.A.1.14.7
STP k141_42268 k141_42268_177 191425 191979 - TetR_N
TC k141_42268 k141_42268_178 192064 193563 + 2.A.1.3.43
TF k141_42268 k141_42268_179 193621 194406 - HTH_AraC | HTH_AraC
TC k141_42268 k141_42268_180 194832 197273 + 5.A.3.3.2
TC k141_42268 k141_42268_181 197270 197911 + 5.A.3.3.2
Gene ID: k141_42268_166
Type: TC
Location: 181175 - 181726 (+)
Gene ID: k141_42268_167
Type: pfam
Location: 181860 - 182624 (-)
Gene ID: k141_42268_168
Type: CAZyme
Location: 182661 - 184016 (-)
Gene ID: k141_42268_169
Type: TF
Location: 184177 - 185034 (-)
Gene ID: k141_42268_170
Type: TC
Location: 185036 - 185383 (-)
Gene ID: k141_42268_171
Type: TC
Location: 185445 - 186803 (-)
Gene ID: k141_42268_172
Type: TC
Location: 186898 - 187224 (-)
Gene ID: k141_42268_173
Type: TC
Location: 187678 - 188637 (+)
Gene ID: k141_42268_174
Type: TC
Location: 188647 - 189609 (+)
Gene ID: k141_42268_175
Type: pfam
Location: 189596 - 190603 (+)
Gene ID: k141_42268_176
Type: TC
Location: 190605 - 191360 (+)
Gene ID: k141_42268_177
Type: STP
Location: 191425 - 191979 (-)
Gene ID: k141_42268_178
Type: TC
Location: 192064 - 193563 (+)
Gene ID: k141_42268_179
Type: TF
Location: 193621 - 194406 (-)
Gene ID: k141_42268_180
Type: TC
Location: 194832 - 197273 (+)
Gene ID: k141_42268_181
Type: TC
Location: 197270 - 197911 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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