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Cluster: CGMR076789_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_89103 k141_89103_47 49803 50201 - 2.A.7.22.1
TC k141_89103 k141_89103_48 50198 50539 - 2.A.7.22.1
CAZyme k141_89103 k141_89103_49 50539 52203 - GT83
pfam k141_89103 k141_89103_50 52211 53104 - Polysacc_deac_1
pfam k141_89103 k141_89103_51 53114 55096 - Formyl_trans_N | Epimerase | Formyl_trans_C | GDP_Man_Dehyd
CAZyme k141_89103 k141_89103_52 55096 56076 - GT2
STP k141_89103 k141_89103_53 56077 57222 - Aminotran_1_2
TC k141_89103 k141_89103_54 57364 58113 - 3.A.1.13.1
TC k141_89103 k141_89103_55 58115 59125 - 3.A.1.13.1
Gene ID: k141_89103_47
Type: TC
Location: 49803 - 50201 (-)
Gene ID: k141_89103_48
Type: TC
Location: 50198 - 50539 (-)
Gene ID: k141_89103_49
Type: CAZyme
Location: 50539 - 52203 (-)
Gene ID: k141_89103_50
Type: pfam
Location: 52211 - 53104 (-)
Gene ID: k141_89103_51
Type: pfam
Location: 53114 - 55096 (-)
Gene ID: k141_89103_52
Type: CAZyme
Location: 55096 - 56076 (-)
Gene ID: k141_89103_53
Type: STP
Location: 56077 - 57222 (-)
Gene ID: k141_89103_54
Type: TC
Location: 57364 - 58113 (-)
Gene ID: k141_89103_55
Type: TC
Location: 58115 - 59125 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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