Cluster: CGMR076789_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076789
- CGC Family ID: CGCFAM_04726
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_82702 | k141_82702_11 | 9918 | 11168 | - | 2.A.42.1.2 |
| pfam | k141_82702 | k141_82702_12 | 11241 | 12644 | - | Aminotran_1_2 | Beta_elim_lyase |
| TC | k141_82702 | k141_82702_13 | 13691 | 15376 | + | 1.B.20.1.2 |
| TC | k141_82702 | k141_82702_14 | 15410 | 20152 | + | 1.C.75.1.1 |
| TC | k141_82702 | k141_82702_15 | 20354 | 23062 | - | 3.A.5.1.1 |
| pfam | k141_82702 | k141_82702_16 | 23162 | 23689 | - | SecM |
| pfam | k141_82702 | k141_82702_17 | 23735 | 24250 | + | DciA |
| CAZyme | k141_82702 | k141_82702_18 | 24285 | 25205 | - | CE11 |
Gene ID: k141_82702_11
Type: TC
Location: 9918 - 11168 (-)
Type: TC
Location: 9918 - 11168 (-)
Gene ID: k141_82702_12
Type: pfam
Location: 11241 - 12644 (-)
Type: pfam
Location: 11241 - 12644 (-)
Gene ID: k141_82702_13
Type: TC
Location: 13691 - 15376 (+)
Type: TC
Location: 13691 - 15376 (+)
Gene ID: k141_82702_14
Type: TC
Location: 15410 - 20152 (+)
Type: TC
Location: 15410 - 20152 (+)
Gene ID: k141_82702_15
Type: TC
Location: 20354 - 23062 (-)
Type: TC
Location: 20354 - 23062 (-)
Gene ID: k141_82702_16
Type: pfam
Location: 23162 - 23689 (-)
Type: pfam
Location: 23162 - 23689 (-)
Gene ID: k141_82702_17
Type: pfam
Location: 23735 - 24250 (+)
Type: pfam
Location: 23735 - 24250 (+)
Gene ID: k141_82702_18
Type: CAZyme
Location: 24285 - 25205 (-)
Type: CAZyme
Location: 24285 - 25205 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Proteus
Species
Proteus sp023454395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.