Cluster: CGMR076719_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR076719
- CGC Family ID: CGCFAM_00013
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_80301 | k141_80301_13 | 9000 | 11105 | + | GT4 |
| CAZyme | k141_80301 | k141_80301_14 | 11102 | 12127 | + | GT2 |
| pfam | k141_80301 | k141_80301_15 | 12317 | 13789 | + | Mur_ligase | Mur_ligase_C | Mur_ligase_M |
| TC | k141_80301 | k141_80301_16 | 13800 | 14780 | + | 9.B.146.1.6 |
| TC | k141_80301 | k141_80301_17 | 14801 | 15949 | + | 2.A.103.1.3 |
| CAZyme | k141_80301 | k141_80301_18 | 15961 | 17079 | + | GT28 |
Gene ID: k141_80301_13
Type: CAZyme
Location: 9000 - 11105 (+)
Type: CAZyme
Location: 9000 - 11105 (+)
Gene ID: k141_80301_14
Type: CAZyme
Location: 11102 - 12127 (+)
Type: CAZyme
Location: 11102 - 12127 (+)
Gene ID: k141_80301_15
Type: pfam
Location: 12317 - 13789 (+)
Type: pfam
Location: 12317 - 13789 (+)
Gene ID: k141_80301_16
Type: TC
Location: 13800 - 14780 (+)
Type: TC
Location: 13800 - 14780 (+)
Gene ID: k141_80301_17
Type: TC
Location: 14801 - 15949 (+)
Type: TC
Location: 14801 - 15949 (+)
Gene ID: k141_80301_18
Type: CAZyme
Location: 15961 - 17079 (+)
Type: CAZyme
Location: 15961 - 17079 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-273
Species
CAG-273 sp003534295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_80301_16 | vegan > omnivore | 1.71796 | 0.00178 |