Cluster: CGMR076719_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076719
- CGC Family ID: CGCFAM_02833
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_142627 | k141_142627_8 | 7875 | 9821 | - | GH15 |
| pfam | k141_142627 | k141_142627_9 | 9834 | 11483 | - | Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6 |
| NULL(UNKNOWN) | k141_142627 | k141_142627_10 | 11496 | 13010 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_142627 | k141_142627_11 | 13022 | 14731 | - | 3.A.12.1.1 |
Gene ID: k141_142627_8
Type: CAZyme
Location: 7875 - 9821 (-)
Type: CAZyme
Location: 7875 - 9821 (-)
Gene ID: k141_142627_9
Type: pfam
Location: 9834 - 11483 (-)
Type: pfam
Location: 9834 - 11483 (-)
Gene ID: k141_142627_10
Type:
Location: 11496 - 13010 (-)
Type:
Location: 11496 - 13010 (-)
Gene ID: k141_142627_11
Type: TC
Location: 13022 - 14731 (-)
Type: TC
Location: 13022 - 14731 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-273
Species
CAG-273 sp003534295
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_142627_9 | vegan > omnivore | 1.85395 | 0.00178 |
| k141_142627_9 | vegetarian > omnivore | 1.00469 | 0.02605 |