Cluster: CGMR076660_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076660
- CGC Family ID: CGCFAM_03577
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_306637 | k141_306637_20 | 19439 | 20884 | + | 2.A.1.3.19 |
| STP | k141_306637 | k141_306637_21 | 20871 | 21386 | + | TetR_N |
| TC | k141_306637 | k141_306637_22 | 21396 | 22685 | + | 2.A.1.24.5 |
| pfam | k141_306637 | k141_306637_23 | 22666 | 23634 | - | DAPDH_C |
| TC | k141_306637 | k141_306637_24 | 23889 | 25415 | + | 2.A.79.1.1 |
| NULL(UNKNOWN) | k141_306637 | k141_306637_25 | 25468 | 25737 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_306637 | k141_306637_26 | 25744 | 27144 | + | GT20 |
Gene ID: k141_306637_20
Type: TC
Location: 19439 - 20884 (+)
Type: TC
Location: 19439 - 20884 (+)
Gene ID: k141_306637_21
Type: STP
Location: 20871 - 21386 (+)
Type: STP
Location: 20871 - 21386 (+)
Gene ID: k141_306637_22
Type: TC
Location: 21396 - 22685 (+)
Type: TC
Location: 21396 - 22685 (+)
Gene ID: k141_306637_23
Type: pfam
Location: 22666 - 23634 (-)
Type: pfam
Location: 22666 - 23634 (-)
Gene ID: k141_306637_24
Type: TC
Location: 23889 - 25415 (+)
Type: TC
Location: 23889 - 25415 (+)
Gene ID: k141_306637_25
Type:
Location: 25468 - 25737 (+)
Type:
Location: 25468 - 25737 (+)
Gene ID: k141_306637_26
Type: CAZyme
Location: 25744 - 27144 (+)
Type: CAZyme
Location: 25744 - 27144 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.