Cluster: CGMR076646_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076646
- CGC Family ID: CGCFAM_00974
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_40636 | k141_40636_2 | 280 | 1371 | - | GT2 |
| pfam | k141_40636 | k141_40636_3 | 1670 | 2725 | - | DUF6612 |
| TC | k141_40636 | k141_40636_4 | 2904 | 4073 | - | 2.A.4.7.4 |
Gene ID: k141_40636_2
Type: CAZyme
Location: 280 - 1371 (-)
Type: CAZyme
Location: 280 - 1371 (-)
Gene ID: k141_40636_3
Type: pfam
Location: 1670 - 2725 (-)
Type: pfam
Location: 1670 - 2725 (-)
Gene ID: k141_40636_4
Type: TC
Location: 2904 - 4073 (-)
Type: TC
Location: 2904 - 4073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900066785
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_40636_2 | vegetarian > omnivore | 1.14384 | 0.04626 |
| k141_40636_2 | vegetarian > vegan | 1.40457 | 0.02575 |