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Cluster: CGMR076646_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_116042 k141_116042_11 9196 9957 - 3.A.1.7.5
TC k141_116042 k141_116042_12 10025 10903 - 3.A.1.7.5
TC k141_116042 k141_116042_13 10907 11845 - 3.A.1.7.5
pfam k141_116042 k141_116042_14 12031 12981 - PBP_like | PBP_like_2 | SBP_bac_11
pfam k141_116042 k141_116042_15 13437 15203 - LytR_cpsA_psr
TC k141_116042 k141_116042_16 15220 16638 - 9.B.18.1.1
CAZyme k141_116042 k141_116042_17 16879 17865 - GT2
CAZyme k141_116042 k141_116042_18 17862 20060 - GT2 | GT2
CAZyme k141_116042 k141_116042_19 20057 21016 - GT2
Gene ID: k141_116042_11
Type: TC
Location: 9196 - 9957 (-)
Gene ID: k141_116042_12
Type: TC
Location: 10025 - 10903 (-)
Gene ID: k141_116042_13
Type: TC
Location: 10907 - 11845 (-)
Gene ID: k141_116042_14
Type: pfam
Location: 12031 - 12981 (-)
Gene ID: k141_116042_15
Type: pfam
Location: 13437 - 15203 (-)
Gene ID: k141_116042_16
Type: TC
Location: 15220 - 16638 (-)
Gene ID: k141_116042_17
Type: CAZyme
Location: 16879 - 17865 (-)
Gene ID: k141_116042_18
Type: CAZyme
Location: 17862 - 20060 (-)
Gene ID: k141_116042_19
Type: CAZyme
Location: 20057 - 21016 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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