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Cluster: CGMR076646_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_168507 k141_168507_6 6552 7643 + GH33
pfam k141_168507 k141_168507_7 7643 8866 + LacY_symp | MFS_1 | MFS_1_like
TC k141_168507 k141_168507_8 9274 10227 + 3.A.1.5.20
TC k141_168507 k141_168507_9 10243 11109 + 3.A.1.5.20
TC k141_168507 k141_168507_10 11130 12800 + 3.A.1.5.20
peptidase k141_168507 k141_168507_11 12830 14245 + M20.UNW
TC k141_168507 k141_168507_12 14265 15248 + 3.A.1.5.20
TC k141_168507 k141_168507_13 15249 16250 + 3.A.1.5.20
Gene ID: k141_168507_6
Type: CAZyme
Location: 6552 - 7643 (+)
Gene ID: k141_168507_7
Type: pfam
Location: 7643 - 8866 (+)
Gene ID: k141_168507_8
Type: TC
Location: 9274 - 10227 (+)
Gene ID: k141_168507_9
Type: TC
Location: 10243 - 11109 (+)
Gene ID: k141_168507_10
Type: TC
Location: 11130 - 12800 (+)
Gene ID: k141_168507_11
Type: peptidase
Location: 12830 - 14245 (+)
Gene ID: k141_168507_12
Type: TC
Location: 14265 - 15248 (+)
Gene ID: k141_168507_13
Type: TC
Location: 15249 - 16250 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_168507_12 vegetarian > omnivore 1.22517 0.01497

🧭 Explore Read Mapping of CGC

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