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Cluster: CGMR076646_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_108845 k141_108845_5 4146 5960 - CE1
CAZyme k141_108845 k141_108845_6 5960 7741 - CE1
TC k141_108845 k141_108845_7 7775 8728 - 3.A.1.5.15
TC k141_108845 k141_108845_8 8730 9710 - 3.A.1.5.2
TC k141_108845 k141_108845_9 9726 10592 - 3.A.1.5.20
TC k141_108845 k141_108845_10 10592 11560 - 3.A.1.5.11
TC k141_108845 k141_108845_11 11698 13350 - 3.A.1.5.39
TF k141_108845 k141_108845_12 13636 14622 + LacI
TC k141_108845 k141_108845_13 14748 15476 - 9.B.120.1.1
Gene ID: k141_108845_5
Type: CAZyme
Location: 4146 - 5960 (-)
Gene ID: k141_108845_6
Type: CAZyme
Location: 5960 - 7741 (-)
Gene ID: k141_108845_7
Type: TC
Location: 7775 - 8728 (-)
Gene ID: k141_108845_8
Type: TC
Location: 8730 - 9710 (-)
Gene ID: k141_108845_9
Type: TC
Location: 9726 - 10592 (-)
Gene ID: k141_108845_10
Type: TC
Location: 10592 - 11560 (-)
Gene ID: k141_108845_11
Type: TC
Location: 11698 - 13350 (-)
Gene ID: k141_108845_12
Type: TF
Location: 13636 - 14622 (+)
Gene ID: k141_108845_13
Type: TC
Location: 14748 - 15476 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_108845_10 vegetarian > vegan 1.26743 0.00573
k141_108845_12 vegetarian > vegan 1.30193 0.00454

🧭 Explore Read Mapping of CGC

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