Cluster: CGMR076515_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076515
- CGC Family ID: CGCFAM_01741
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_228003 | k141_228003_20 | 22714 | 24102 | + | 9.B.145.1.2 |
| pfam | k141_228003 | k141_228003_21 | 24095 | 25063 | + | Lip_A_acyltrans |
| CAZyme | k141_228003 | k141_228003_22 | 25060 | 26052 | + | GT27 |
| CAZyme | k141_228003 | k141_228003_23 | 26049 | 26771 | + | GT2 |
Gene ID: k141_228003_20
Type: TC
Location: 22714 - 24102 (+)
Type: TC
Location: 22714 - 24102 (+)
Gene ID: k141_228003_21
Type: pfam
Location: 24095 - 25063 (+)
Type: pfam
Location: 24095 - 25063 (+)
Gene ID: k141_228003_22
Type: CAZyme
Location: 25060 - 26052 (+)
Type: CAZyme
Location: 25060 - 26052 (+)
Gene ID: k141_228003_23
Type: CAZyme
Location: 26049 - 26771 (+)
Type: CAZyme
Location: 26049 - 26771 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.