Cluster: CGMR076515_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076515
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_199057 | k141_199057_43 | 47939 | 49051 | - | GT28 |
| peptidase | k141_199057 | k141_199057_44 | 49075 | 50616 | - | S16.UNW |
| pfam | k141_199057 | k141_199057_45 | 50699 | 52264 | - | DnaB | DnaB_C | AAA_25 |
| TC | k141_199057 | k141_199057_46 | 52399 | 53019 | - | 2.A.124.1.4 |
| pfam | k141_199057 | k141_199057_47 | 53016 | 53294 | - | Lys_export |
| STP | k141_199057 | k141_199057_48 | 53504 | 54214 | - | Pribosyltran |
| TC | k141_199057 | k141_199057_49 | 54198 | 56135 | - | 3.A.11.3.1 |
Gene ID: k141_199057_43
Type: CAZyme
Location: 47939 - 49051 (-)
Type: CAZyme
Location: 47939 - 49051 (-)
Gene ID: k141_199057_44
Type: peptidase
Location: 49075 - 50616 (-)
Type: peptidase
Location: 49075 - 50616 (-)
Gene ID: k141_199057_45
Type: pfam
Location: 50699 - 52264 (-)
Type: pfam
Location: 50699 - 52264 (-)
Gene ID: k141_199057_46
Type: TC
Location: 52399 - 53019 (-)
Type: TC
Location: 52399 - 53019 (-)
Gene ID: k141_199057_47
Type: pfam
Location: 53016 - 53294 (-)
Type: pfam
Location: 53016 - 53294 (-)
Gene ID: k141_199057_48
Type: STP
Location: 53504 - 54214 (-)
Type: STP
Location: 53504 - 54214 (-)
Gene ID: k141_199057_49
Type: TC
Location: 54198 - 56135 (-)
Type: TC
Location: 54198 - 56135 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.