Cluster: CGMR076003_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR076003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_105057 | k141_105057_28 | 32519 | 33598 | - | 1.B.1.3.3 |
| CAZyme | k141_105057 | k141_105057_29 | 33764 | 34717 | - | GT9 |
| TC | k141_105057 | k141_105057_30 | 34714 | 35619 | - | 2.A.7.3.58 |
| CAZyme | k141_105057 | k141_105057_31 | 35616 | 36659 | - | GT9 |
Gene ID: k141_105057_28
Type: TC
Location: 32519 - 33598 (-)
Type: TC
Location: 32519 - 33598 (-)
Gene ID: k141_105057_29
Type: CAZyme
Location: 33764 - 34717 (-)
Type: CAZyme
Location: 33764 - 34717 (-)
Gene ID: k141_105057_30
Type: TC
Location: 34714 - 35619 (-)
Type: TC
Location: 34714 - 35619 (-)
Gene ID: k141_105057_31
Type: CAZyme
Location: 35616 - 36659 (-)
Type: CAZyme
Location: 35616 - 36659 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_105057_28 | vegetarian > omnivore | 1.07113 | 0.01077 |
| k141_105057_29 | vegetarian > omnivore | 1.35653 | 0.01077 |