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Cluster: CGMR076003_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_110303 k141_110303_63 60636 62045 + 2.A.1.3.51
TC k141_110303 k141_110303_64 62179 63825 + 3.A.1.5.27
pfam k141_110303 k141_110303_65 63892 64524 + PNPOx_N | PNP_phzG_C | Pyridox_oxase_2
CAZyme k141_110303 k141_110303_66 64600 65706 - GH177
pfam k141_110303 k141_110303_67 65717 66790 - GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3
TF k141_110303 k141_110303_68 66780 67490 - GntR
TC k141_110303 k141_110303_69 67664 68890 + 2.A.1.12.1
TC k141_110303 k141_110303_70 69045 70430 + 2.A.47.5.2
Gene ID: k141_110303_63
Type: TC
Location: 60636 - 62045 (+)
Gene ID: k141_110303_64
Type: TC
Location: 62179 - 63825 (+)
Gene ID: k141_110303_65
Type: pfam
Location: 63892 - 64524 (+)
Gene ID: k141_110303_66
Type: CAZyme
Location: 64600 - 65706 (-)
Gene ID: k141_110303_67
Type: pfam
Location: 65717 - 66790 (-)
Gene ID: k141_110303_68
Type: TF
Location: 66780 - 67490 (-)
Gene ID: k141_110303_69
Type: TC
Location: 67664 - 68890 (+)
Gene ID: k141_110303_70
Type: TC
Location: 69045 - 70430 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_110303_64 vegan > omnivore 1.22151 0.02034

🧭 Explore Read Mapping of CGC

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