Cluster: CGMR076003_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_21031 | k141_21031_21 | 16354 | 17385 | + | GT9 |
| TC | k141_21031 | k141_21031_22 | 17335 | 18000 | - | 2.A.115.2.7 |
| pfam | k141_21031 | k141_21031_23 | 18191 | 19732 | + | PFL-like | YjjI-like |
| TC | k141_21031 | k141_21031_24 | 19774 | 21639 | - | 2.A.16.2.2 |
| TC | k141_21031 | k141_21031_25 | 21639 | 21944 | - | 9.B.21.2.1 |
Gene ID: k141_21031_21
Type: CAZyme
Location: 16354 - 17385 (+)
Type: CAZyme
Location: 16354 - 17385 (+)
Gene ID: k141_21031_22
Type: TC
Location: 17335 - 18000 (-)
Type: TC
Location: 17335 - 18000 (-)
Gene ID: k141_21031_23
Type: pfam
Location: 18191 - 19732 (+)
Type: pfam
Location: 18191 - 19732 (+)
Gene ID: k141_21031_24
Type: TC
Location: 19774 - 21639 (-)
Type: TC
Location: 19774 - 21639 (-)
Gene ID: k141_21031_25
Type: TC
Location: 21639 - 21944 (-)
Type: TC
Location: 21639 - 21944 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_21031_21 | vegan > omnivore | 1.34955 | 0.02034 |
| k141_21031_21 | vegetarian > omnivore | 1.27504 | 0.01077 |
| k141_21031_22 | vegan > omnivore | 1.23502 | 0.02034 |
| k141_21031_22 | vegetarian > omnivore | 1.12684 | 0.01077 |