Cluster: CGMR076003_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076003
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86936 | k141_86936_83 | 84360 | 84851 | - | 9.B.105.1.1 |
| pfam | k141_86936 | k141_86936_84 | 84968 | 86338 | - | Hexapep | Hexapep | NTP_transferase | IspD | CTP_transf_3 | NTP_transf_3 | Hexapep_2 | Hexapep_2 |
| peptidase | k141_86936 | k141_86936_85 | 86597 | 88234 | + | C26.964 |
| CAZyme | k141_86936 | k141_86936_86 | 88357 | 89292 | + | GT2 |
Gene ID: k141_86936_83
Type: TC
Location: 84360 - 84851 (-)
Type: TC
Location: 84360 - 84851 (-)
Gene ID: k141_86936_84
Type: pfam
Location: 84968 - 86338 (-)
Type: pfam
Location: 84968 - 86338 (-)
Gene ID: k141_86936_85
Type: peptidase
Location: 86597 - 88234 (+)
Type: peptidase
Location: 86597 - 88234 (+)
Gene ID: k141_86936_86
Type: CAZyme
Location: 88357 - 89292 (+)
Type: CAZyme
Location: 88357 - 89292 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_86936_83 | vegan > omnivore | 1.10161 | 0.02034 |
| k141_86936_83 | vegetarian > omnivore | 1.04342 | 0.01077 |