Cluster: CGMR076003_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR076003
- CGC Family ID: CGCFAM_00029
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_86936 | k141_86936_50 | 48398 | 50293 | - | 9.B.18.2.1 |
| TC | k141_86936 | k141_86936_51 | 50331 | 50918 | - | 9.B.18.1.3 |
| pfam | k141_86936 | k141_86936_52 | 50921 | 52132 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| CAZyme | k141_86936 | k141_86936_53 | 52146 | 52958 | - | GT2 |
| pfam | k141_86936 | k141_86936_54 | 52969 | 54000 | - | Stealth_CR2 | Stealth_CR1 |
| TC | k141_86936 | k141_86936_55 | 54010 | 55377 | - | 9.B.67.3.2 |
| TC | k141_86936 | k141_86936_56 | 55379 | 56626 | - | 2.A.66.2.10 |
Gene ID: k141_86936_50
Type: TC
Location: 48398 - 50293 (-)
Type: TC
Location: 48398 - 50293 (-)
Gene ID: k141_86936_51
Type: TC
Location: 50331 - 50918 (-)
Type: TC
Location: 50331 - 50918 (-)
Gene ID: k141_86936_52
Type: pfam
Location: 50921 - 52132 (-)
Type: pfam
Location: 50921 - 52132 (-)
Gene ID: k141_86936_53
Type: CAZyme
Location: 52146 - 52958 (-)
Type: CAZyme
Location: 52146 - 52958 (-)
Gene ID: k141_86936_54
Type: pfam
Location: 52969 - 54000 (-)
Type: pfam
Location: 52969 - 54000 (-)
Gene ID: k141_86936_55
Type: TC
Location: 54010 - 55377 (-)
Type: TC
Location: 54010 - 55377 (-)
Gene ID: k141_86936_56
Type: TC
Location: 55379 - 56626 (-)
Type: TC
Location: 55379 - 56626 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D parainfluenzae_S
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.