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Cluster: CGMR075991_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_18883 k141_18883_8 9157 10380 + GT4
pfam k141_18883 k141_18883_9 10387 10986 + VTT_dom
CAZyme k141_18883 k141_18883_10 10999 12012 + GT4
pfam k141_18883 k141_18883_11 12067 13233 - ATP-grasp_4
TC k141_18883 k141_18883_12 13273 14379 - 1.A.23.1.1
TF k141_18883 k141_18883_13 14546 15217 - Crp
pfam k141_18883 k141_18883_14 15633 16316 + PepSY | PepSY
TC k141_18883 k141_18883_15 16404 18290 - 1.C.39.4.5
pfam k141_18883 k141_18883_16 18445 19833 - MMR_HSR1 | FeoB_N | AIG1 | TrmE_N | MnmE_helical
TC k141_18883 k141_18883_17 20211 21233 + 3.A.1.15.8
TC k141_18883 k141_18883_18 21248 22057 + 3.A.1.15.8
TC k141_18883 k141_18883_19 22026 22943 + 3.A.1.15.8
TC k141_18883 k141_18883_20 22940 23794 + 3.A.1.15.8
TC k141_18883 k141_18883_21 24187 24861 - 3.A.1.132.9
Gene ID: k141_18883_8
Type: CAZyme
Location: 9157 - 10380 (+)
Gene ID: k141_18883_9
Type: pfam
Location: 10387 - 10986 (+)
Gene ID: k141_18883_10
Type: CAZyme
Location: 10999 - 12012 (+)
Gene ID: k141_18883_11
Type: pfam
Location: 12067 - 13233 (-)
Gene ID: k141_18883_12
Type: TC
Location: 13273 - 14379 (-)
Gene ID: k141_18883_13
Type: TF
Location: 14546 - 15217 (-)
Gene ID: k141_18883_14
Type: pfam
Location: 15633 - 16316 (+)
Gene ID: k141_18883_15
Type: TC
Location: 16404 - 18290 (-)
Gene ID: k141_18883_16
Type: pfam
Location: 18445 - 19833 (-)
Gene ID: k141_18883_17
Type: TC
Location: 20211 - 21233 (+)
Gene ID: k141_18883_18
Type: TC
Location: 21248 - 22057 (+)
Gene ID: k141_18883_19
Type: TC
Location: 22026 - 22943 (+)
Gene ID: k141_18883_20
Type: TC
Location: 22940 - 23794 (+)
Gene ID: k141_18883_21
Type: TC
Location: 24187 - 24861 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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