Cluster: CGMR075991_CGC18
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 4
- Substrate: beta-glucan
- Genome ID: CGMR075991
- CGC Family ID: CGCFAM_00176
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_3834 | k141_3834_50 | 54238 | 55746 | + | 4.A.1.1.9 |
| CAZyme | k141_3834 | k141_3834_51 | 55793 | 57211 | + | GH1 |
| pfam | k141_3834 | k141_3834_52 | 57222 | 58058 | + | Hydrolase_3 |
| CAZyme | k141_3834 | k141_3834_53 | 58073 | 59506 | + | GH1 |
| TC | k141_3834 | k141_3834_54 | 59617 | 59931 | + | 4.A.3.2.6 |
| TF | k141_3834 | k141_3834_55 | 59952 | 61961 | + | HTH_11 | Mga |
| TC | k141_3834 | k141_3834_56 | 61954 | 62271 | + | 4.A.3.2.2 |
| NULL(UNKNOWN) | k141_3834 | k141_3834_57 | 62271 | 62789 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_3834 | k141_3834_58 | 62779 | 64134 | + | 4.A.3.2.3 |
| pfam | k141_3834 | k141_3834_59 | 64159 | 64329 | + | His_Phos_1 |
| pfam | k141_3834 | k141_3834_60 | 64418 | 64759 | + | His_Phos_1 |
| CAZyme | k141_3834 | k141_3834_61 | 64761 | 66188 | + | GH1 |
| TC | k141_3834 | k141_3834_62 | 66564 | 67901 | + | 4.A.3.2.3 |
| TC | k141_3834 | k141_3834_63 | 67906 | 68232 | + | 4.A.3.2.2 |
| pfam | k141_3834 | k141_3834_64 | 68232 | 68540 | + | PTS_IIB |
| STP | k141_3834 | k141_3834_65 | 68611 | 69522 | + | SIS |
| CAZyme | k141_3834 | k141_3834_66 | 69519 | 70610 | + | GH170 |
Gene ID: k141_3834_50
Type: TC
Location: 54238 - 55746 (+)
Type: TC
Location: 54238 - 55746 (+)
Gene ID: k141_3834_51
Type: CAZyme
Location: 55793 - 57211 (+)
Type: CAZyme
Location: 55793 - 57211 (+)
Gene ID: k141_3834_52
Type: pfam
Location: 57222 - 58058 (+)
Type: pfam
Location: 57222 - 58058 (+)
Gene ID: k141_3834_53
Type: CAZyme
Location: 58073 - 59506 (+)
Type: CAZyme
Location: 58073 - 59506 (+)
Gene ID: k141_3834_54
Type: TC
Location: 59617 - 59931 (+)
Type: TC
Location: 59617 - 59931 (+)
Gene ID: k141_3834_55
Type: TF
Location: 59952 - 61961 (+)
Type: TF
Location: 59952 - 61961 (+)
Gene ID: k141_3834_56
Type: TC
Location: 61954 - 62271 (+)
Type: TC
Location: 61954 - 62271 (+)
Gene ID: k141_3834_57
Type:
Location: 62271 - 62789 (+)
Type:
Location: 62271 - 62789 (+)
Gene ID: k141_3834_58
Type: TC
Location: 62779 - 64134 (+)
Type: TC
Location: 62779 - 64134 (+)
Gene ID: k141_3834_59
Type: pfam
Location: 64159 - 64329 (+)
Type: pfam
Location: 64159 - 64329 (+)
Gene ID: k141_3834_60
Type: pfam
Location: 64418 - 64759 (+)
Type: pfam
Location: 64418 - 64759 (+)
Gene ID: k141_3834_61
Type: CAZyme
Location: 64761 - 66188 (+)
Type: CAZyme
Location: 64761 - 66188 (+)
Gene ID: k141_3834_62
Type: TC
Location: 66564 - 67901 (+)
Type: TC
Location: 66564 - 67901 (+)
Gene ID: k141_3834_63
Type: TC
Location: 67906 - 68232 (+)
Type: TC
Location: 67906 - 68232 (+)
Gene ID: k141_3834_64
Type: pfam
Location: 68232 - 68540 (+)
Type: pfam
Location: 68232 - 68540 (+)
Gene ID: k141_3834_65
Type: STP
Location: 68611 - 69522 (+)
Type: STP
Location: 68611 - 69522 (+)
Gene ID: k141_3834_66
Type: CAZyme
Location: 69519 - 70610 (+)
Type: CAZyme
Location: 69519 - 70610 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Carnobacteriaceae
Genus
Dolosigranulum
Species
Dolosigranulum pigrum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.