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Cluster: CGMR075991_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_15211 k141_15211_5 4037 4912 + 2.A.9.3.2
pfam k141_15211 k141_15211_6 4937 5863 + R3H | KH_KhpA-B | Jag_N
pfam k141_15211 k141_15211_7 5937 7220 + Mur_ligase_C | Mur_ligase_M
TC k141_15211 k141_15211_8 7407 8915 + 4.A.1.2.13
CAZyme k141_15211 k141_15211_9 9008 10663 + GH13_29
TC k141_15211 k141_15211_10 10709 11269 - 3.A.1.25.5
TF k141_15211 k141_15211_11 11441 12085 + Fe_dep_repress
pfam k141_15211 k141_15211_12 12351 13652 + CC_PcsB
TC k141_15211 k141_15211_13 14355 15272 + 3.A.1.131.1
Gene ID: k141_15211_5
Type: TC
Location: 4037 - 4912 (+)
Gene ID: k141_15211_6
Type: pfam
Location: 4937 - 5863 (+)
Gene ID: k141_15211_7
Type: pfam
Location: 5937 - 7220 (+)
Gene ID: k141_15211_8
Type: TC
Location: 7407 - 8915 (+)
Gene ID: k141_15211_9
Type: CAZyme
Location: 9008 - 10663 (+)
Gene ID: k141_15211_10
Type: TC
Location: 10709 - 11269 (-)
Gene ID: k141_15211_11
Type: TF
Location: 11441 - 12085 (+)
Gene ID: k141_15211_12
Type: pfam
Location: 12351 - 13652 (+)
Gene ID: k141_15211_13
Type: TC
Location: 14355 - 15272 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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