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Cluster: CGMR075240_CGC45

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_50718 k141_50718_6 4905 6293 - 2.A.6.2.11
TC k141_50718 k141_50718_7 6305 9730 - 2.A.6.2.22
TC k141_50718 k141_50718_8 9756 11024 - 2.A.6.2.29
TC k141_50718 k141_50718_9 11256 11894 + 9.B.28.2.3
pfam k141_50718 k141_50718_10 11898 12710 + adh_short | Epimerase | KR | adh_short_C2
pfam k141_50718 k141_50718_11 12724 13908 + AP_endonuc_2 | UxuA
TC k141_50718 k141_50718_12 14134 15432 - 2.A.56.1.5
TC k141_50718 k141_50718_13 15445 15915 - 2.A.56.1.5
TC k141_50718 k141_50718_14 15899 16891 - 2.A.56.1.5
STP k141_50718 k141_50718_15 17076 17870 + Peptidase_M23
NULL(UNKNOWN) k141_50718 k141_50718_16 17986 18180 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_50718 k141_50718_17 18489 20801 - GH3
Gene ID: k141_50718_6
Type: TC
Location: 4905 - 6293 (-)
Gene ID: k141_50718_7
Type: TC
Location: 6305 - 9730 (-)
Gene ID: k141_50718_8
Type: TC
Location: 9756 - 11024 (-)
Gene ID: k141_50718_9
Type: TC
Location: 11256 - 11894 (+)
Gene ID: k141_50718_10
Type: pfam
Location: 11898 - 12710 (+)
Gene ID: k141_50718_11
Type: pfam
Location: 12724 - 13908 (+)
Gene ID: k141_50718_12
Type: TC
Location: 14134 - 15432 (-)
Gene ID: k141_50718_13
Type: TC
Location: 15445 - 15915 (-)
Gene ID: k141_50718_14
Type: TC
Location: 15899 - 16891 (-)
Gene ID: k141_50718_15
Type: STP
Location: 17076 - 17870 (+)
Gene ID: k141_50718_16
Type:
Location: 17986 - 18180 (+)
Gene ID: k141_50718_17
Type: CAZyme
Location: 18489 - 20801 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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