Cluster: CGMR075240_CGC34
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR075240
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_174839 | k141_174839_52 | 73712 | 74824 | + | 3.A.11.1.3 |
| STP | k141_174839 | k141_174839_53 | 75316 | 75969 | - | SIS |
| pfam | k141_174839 | k141_174839_54 | 75976 | 76950 | - | ROK |
| TC | k141_174839 | k141_174839_55 | 76943 | 78103 | - | 2.A.1.7.16 |
| CAZyme | k141_174839 | k141_174839_56 | 78105 | 80651 | - | GH38 |
| pfam | k141_174839 | k141_174839_57 | 80685 | 81944 | - | SusD_RagB | SusD-like_3 |
| TC | k141_174839 | k141_174839_58 | 82291 | 85461 | - | 1.B.14.6.1 |
Gene ID: k141_174839_52
Type: TC
Location: 73712 - 74824 (+)
Type: TC
Location: 73712 - 74824 (+)
Gene ID: k141_174839_53
Type: STP
Location: 75316 - 75969 (-)
Type: STP
Location: 75316 - 75969 (-)
Gene ID: k141_174839_54
Type: pfam
Location: 75976 - 76950 (-)
Type: pfam
Location: 75976 - 76950 (-)
Gene ID: k141_174839_55
Type: TC
Location: 76943 - 78103 (-)
Type: TC
Location: 76943 - 78103 (-)
Gene ID: k141_174839_56
Type: CAZyme
Location: 78105 - 80651 (-)
Type: CAZyme
Location: 78105 - 80651 (-)
Gene ID: k141_174839_57
Type: pfam
Location: 80685 - 81944 (-)
Type: pfam
Location: 80685 - 81944 (-)
Gene ID: k141_174839_58
Type: TC
Location: 82291 - 85461 (-)
Type: TC
Location: 82291 - 85461 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.