Cluster: CGMR075240_CGC21
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR075240
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_93999 | k141_93999_25 | 30655 | 31911 | + | 2.A.1.7.18 |
| CAZyme | k141_93999 | k141_93999_26 | 31959 | 33944 | + | GH97 |
| CAZyme | k141_93999 | k141_93999_27 | 34305 | 35750 | - | PL9_2 |
| CAZyme | k141_93999 | k141_93999_28 | 35773 | 37977 | - | GH148 |
| CAZyme | k141_93999 | k141_93999_29 | 38054 | 40336 | - | GH9 |
| pfam | k141_93999 | k141_93999_30 | 40420 | 42114 | - | SusD_RagB | SusD-like_3 |
| TC | k141_93999 | k141_93999_31 | 42130 | 44934 | - | 1.B.14.6.1 |
| pfam | k141_93999 | k141_93999_32 | 44962 | 46845 | - | SusD_RagB | SusD-like_3 |
| TC | k141_93999 | k141_93999_33 | 46859 | 49987 | - | 1.B.14.6.1 |
| CAZyme | k141_93999 | k141_93999_34 | 50240 | 51352 | - | GH5_36 |
| pfam | k141_93999 | k141_93999_35 | 51539 | 52255 | + | ThiF |
| TC | k141_93999 | k141_93999_36 | 52252 | 52905 | + | 3.A.1.125.1 |
| TC | k141_93999 | k141_93999_37 | 52944 | 54308 | + | 2.A.22.5.3 |
Gene ID: k141_93999_25
Type: TC
Location: 30655 - 31911 (+)
Type: TC
Location: 30655 - 31911 (+)
Gene ID: k141_93999_26
Type: CAZyme
Location: 31959 - 33944 (+)
Type: CAZyme
Location: 31959 - 33944 (+)
Gene ID: k141_93999_27
Type: CAZyme
Location: 34305 - 35750 (-)
Type: CAZyme
Location: 34305 - 35750 (-)
Gene ID: k141_93999_28
Type: CAZyme
Location: 35773 - 37977 (-)
Type: CAZyme
Location: 35773 - 37977 (-)
Gene ID: k141_93999_29
Type: CAZyme
Location: 38054 - 40336 (-)
Type: CAZyme
Location: 38054 - 40336 (-)
Gene ID: k141_93999_30
Type: pfam
Location: 40420 - 42114 (-)
Type: pfam
Location: 40420 - 42114 (-)
Gene ID: k141_93999_31
Type: TC
Location: 42130 - 44934 (-)
Type: TC
Location: 42130 - 44934 (-)
Gene ID: k141_93999_32
Type: pfam
Location: 44962 - 46845 (-)
Type: pfam
Location: 44962 - 46845 (-)
Gene ID: k141_93999_33
Type: TC
Location: 46859 - 49987 (-)
Type: TC
Location: 46859 - 49987 (-)
Gene ID: k141_93999_34
Type: CAZyme
Location: 50240 - 51352 (-)
Type: CAZyme
Location: 50240 - 51352 (-)
Gene ID: k141_93999_35
Type: pfam
Location: 51539 - 52255 (+)
Type: pfam
Location: 51539 - 52255 (+)
Gene ID: k141_93999_36
Type: TC
Location: 52252 - 52905 (+)
Type: TC
Location: 52252 - 52905 (+)
Gene ID: k141_93999_37
Type: TC
Location: 52944 - 54308 (+)
Type: TC
Location: 52944 - 54308 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_93999_36 | vegan > omnivore | 1.19505 | 0.03910 |