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Cluster: CGMR075240_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_197285 k141_197285_50 63090 64331 + 2.A.66.2.10
NULL(UNKNOWN) k141_197285 k141_197285_51 64563 65801 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_197285 k141_197285_52 65794 66648 + LicD
CAZyme k141_197285 k141_197285_53 66695 67414 - GT26
CAZyme k141_197285 k141_197285_54 67431 68471 - GT4
pfam k141_197285 k141_197285_55 68461 69063 - Hexapep | Hexapep_2
pfam k141_197285 k141_197285_56 69085 70692 - GNVR
TC k141_197285 k141_197285_57 70700 71479 - 1.B.18.3.3
Gene ID: k141_197285_50
Type: TC
Location: 63090 - 64331 (+)
Gene ID: k141_197285_51
Type:
Location: 64563 - 65801 (+)
Gene ID: k141_197285_52
Type: pfam
Location: 65794 - 66648 (+)
Gene ID: k141_197285_53
Type: CAZyme
Location: 66695 - 67414 (-)
Gene ID: k141_197285_54
Type: CAZyme
Location: 67431 - 68471 (-)
Gene ID: k141_197285_55
Type: pfam
Location: 68461 - 69063 (-)
Gene ID: k141_197285_56
Type: pfam
Location: 69085 - 70692 (-)
Gene ID: k141_197285_57
Type: TC
Location: 70700 - 71479 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacteroidota
→
Class
Bacteroidia
→
Order
Bacteroidales
→
Family
Tannerellaceae
→
Genus
Parabacteroides
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_197285_57 vegan > omnivore 2.32527 0.03851
k141_197285_57 vegetarian > omnivore 1.73687 0.03622

🧭 Explore Read Mapping of CGC

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