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Cluster: CGMR075230_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_185521 k141_185521_11 14805 17255 - 4.A.1.1.8
TF k141_185521 k141_185521_12 17483 18202 + GntR
TC k141_185521 k141_185521_13 18509 19825 + 3.A.1.1.45
TC k141_185521 k141_185521_14 19913 20767 + 3.A.1.1.45
TC k141_185521 k141_185521_15 20767 21606 + 3.A.1.1.45
TC k141_185521 k141_185521_16 21674 22873 + 3.A.1.1.22
CAZyme k141_185521 k141_185521_17 23170 25437 - GT35
CAZyme k141_185521 k141_185521_18 25566 27071 - GH77
Gene ID: k141_185521_11
Type: TC
Location: 14805 - 17255 (-)
Gene ID: k141_185521_12
Type: TF
Location: 17483 - 18202 (+)
Gene ID: k141_185521_13
Type: TC
Location: 18509 - 19825 (+)
Gene ID: k141_185521_14
Type: TC
Location: 19913 - 20767 (+)
Gene ID: k141_185521_15
Type: TC
Location: 20767 - 21606 (+)
Gene ID: k141_185521_16
Type: TC
Location: 21674 - 22873 (+)
Gene ID: k141_185521_17
Type: CAZyme
Location: 23170 - 25437 (-)
Gene ID: k141_185521_18
Type: CAZyme
Location: 25566 - 27071 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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