Cluster: CGMR075230_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR075230
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_10717 | k141_10717_87 | 101125 | 101763 | + | 9.B.18.1.2 |
| CAZyme | k141_10717 | k141_10717_88 | 101764 | 102873 | + | GT4 |
| pfam | k141_10717 | k141_10717_89 | 102873 | 103991 | + | PS_pyruv_trans |
| STP | k141_10717 | k141_10717_90 | 104004 | 105209 | + | Fer4 | Fer4 |
| CAZyme | k141_10717 | k141_10717_91 | 105202 | 106419 | + | GT4 |
| CAZyme | k141_10717 | k141_10717_92 | 106424 | 107380 | + | GT2 |
Gene ID: k141_10717_87
Type: TC
Location: 101125 - 101763 (+)
Type: TC
Location: 101125 - 101763 (+)
Gene ID: k141_10717_88
Type: CAZyme
Location: 101764 - 102873 (+)
Type: CAZyme
Location: 101764 - 102873 (+)
Gene ID: k141_10717_89
Type: pfam
Location: 102873 - 103991 (+)
Type: pfam
Location: 102873 - 103991 (+)
Gene ID: k141_10717_90
Type: STP
Location: 104004 - 105209 (+)
Type: STP
Location: 104004 - 105209 (+)
Gene ID: k141_10717_91
Type: CAZyme
Location: 105202 - 106419 (+)
Type: CAZyme
Location: 105202 - 106419 (+)
Gene ID: k141_10717_92
Type: CAZyme
Location: 106424 - 107380 (+)
Type: CAZyme
Location: 106424 - 107380 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.