Cluster: CGMR074943_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR074943
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_160272 | k141_160272_16 | 15654 | 16892 | + | 2.A.23.1.2 |
| pfam | k141_160272 | k141_160272_17 | 16952 | 18136 | + | Ala_racemase_C | Ala_racemase_N |
| TC | k141_160272 | k141_160272_18 | 18159 | 19406 | + | 2.A.23.1.5 |
| STP | k141_160272 | k141_160272_19 | 19445 | 20482 | + | Aminotran_1_2 |
| CAZyme | k141_160272 | k141_160272_20 | 20632 | 22062 | - | AA4 |
| CAZyme | k141_160272 | k141_160272_21 | 22530 | 23960 | - | AA4 |
Gene ID: k141_160272_16
Type: TC
Location: 15654 - 16892 (+)
Type: TC
Location: 15654 - 16892 (+)
Gene ID: k141_160272_17
Type: pfam
Location: 16952 - 18136 (+)
Type: pfam
Location: 16952 - 18136 (+)
Gene ID: k141_160272_18
Type: TC
Location: 18159 - 19406 (+)
Type: TC
Location: 18159 - 19406 (+)
Gene ID: k141_160272_19
Type: STP
Location: 19445 - 20482 (+)
Type: STP
Location: 19445 - 20482 (+)
Gene ID: k141_160272_20
Type: CAZyme
Location: 20632 - 22062 (-)
Type: CAZyme
Location: 20632 - 22062 (-)
Gene ID: k141_160272_21
Type: CAZyme
Location: 22530 - 23960 (-)
Type: CAZyme
Location: 22530 - 23960 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Synergistota
Class
Synergistia
Order
Synergistales
Family
Dethiosulfovibrionaceae
Genus
Pyramidobacter
Species
Pyramidobacter piscolens_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.