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Cluster: CGMR074943_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_271485 k141_271485_64 74178 74837 + 9.B.18.1.2
pfam k141_271485 k141_271485_65 74850 75719 + 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4
CAZyme k141_271485 k141_271485_66 75796 76932 + GT4
pfam k141_271485 k141_271485_67 77028 78047 + 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme k141_271485 k141_271485_68 78209 79351 + GT4
CAZyme k141_271485 k141_271485_69 79424 80164 + GT32
pfam k141_271485 k141_271485_70 80952 82181 - UPF0020 | Cons_hypoth95 | MTS | PrmA | Methyltransf_15 | Methyltrans_SAM | Methyltransf_31 | PUA_3
pfam k141_271485 k141_271485_71 82321 83406 + A_deaminase
TC k141_271485 k141_271485_72 83742 84275 + 3.A.1.26.5
Gene ID: k141_271485_64
Type: TC
Location: 74178 - 74837 (+)
Gene ID: k141_271485_65
Type: pfam
Location: 74850 - 75719 (+)
Gene ID: k141_271485_66
Type: CAZyme
Location: 75796 - 76932 (+)
Gene ID: k141_271485_67
Type: pfam
Location: 77028 - 78047 (+)
Gene ID: k141_271485_68
Type: CAZyme
Location: 78209 - 79351 (+)
Gene ID: k141_271485_69
Type: CAZyme
Location: 79424 - 80164 (+)
Gene ID: k141_271485_70
Type: pfam
Location: 80952 - 82181 (-)
Gene ID: k141_271485_71
Type: pfam
Location: 82321 - 83406 (+)
Gene ID: k141_271485_72
Type: TC
Location: 83742 - 84275 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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