Cluster: CGMR074525_CGC14
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 10
- Substrate:
- Genome ID: CGMR074525
- CGC Family ID: CGCFAM_00463
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_27958 | k141_27958_1 | 40 | 2124 | + | GT2 | GT8 |
| pfam | k141_27958 | k141_27958_2 | 2121 | 2999 | + | Hexapep | Hexapep_2 |
| CAZyme | k141_27958 | k141_27958_3 | 3039 | 3914 | + | GT2 |
| CAZyme | k141_27958 | k141_27958_4 | 4511 | 5386 | + | GT2 |
| CAZyme | k141_27958 | k141_27958_5 | 5415 | 6425 | + | GT113 |
| CAZyme | k141_27958 | k141_27958_6 | 6435 | 8879 | + | GT101 | GT8 |
| CAZyme | k141_27958 | k141_27958_7 | 8885 | 9769 | + | GT2 |
| CAZyme | k141_27958 | k141_27958_8 | 9794 | 11026 | + | GT8 |
| CAZyme | k141_27958 | k141_27958_9 | 11023 | 12216 | + | GT8 |
| CAZyme | k141_27958 | k141_27958_10 | 12222 | 13112 | + | GT2 |
| TC | k141_27958 | k141_27958_11 | 13177 | 14394 | + | 3.A.5.10.1 |
| TC | k141_27958 | k141_27958_12 | 14404 | 15984 | + | 3.A.5.10.1 |
| TC | k141_27958 | k141_27958_13 | 15968 | 17503 | + | 3.A.5.10.1 |
| TC | k141_27958 | k141_27958_14 | 17500 | 17940 | + | 3.A.5.10.1 |
| TC | k141_27958 | k141_27958_15 | 17933 | 20305 | + | 3.A.5.10.1 |
| CAZyme | k141_27958 | k141_27958_16 | 20317 | 21828 | + | GT4 |
Gene ID: k141_27958_1
Type: CAZyme
Location: 40 - 2124 (+)
Type: CAZyme
Location: 40 - 2124 (+)
Gene ID: k141_27958_2
Type: pfam
Location: 2121 - 2999 (+)
Type: pfam
Location: 2121 - 2999 (+)
Gene ID: k141_27958_3
Type: CAZyme
Location: 3039 - 3914 (+)
Type: CAZyme
Location: 3039 - 3914 (+)
Gene ID: k141_27958_4
Type: CAZyme
Location: 4511 - 5386 (+)
Type: CAZyme
Location: 4511 - 5386 (+)
Gene ID: k141_27958_5
Type: CAZyme
Location: 5415 - 6425 (+)
Type: CAZyme
Location: 5415 - 6425 (+)
Gene ID: k141_27958_6
Type: CAZyme
Location: 6435 - 8879 (+)
Type: CAZyme
Location: 6435 - 8879 (+)
Gene ID: k141_27958_7
Type: CAZyme
Location: 8885 - 9769 (+)
Type: CAZyme
Location: 8885 - 9769 (+)
Gene ID: k141_27958_8
Type: CAZyme
Location: 9794 - 11026 (+)
Type: CAZyme
Location: 9794 - 11026 (+)
Gene ID: k141_27958_9
Type: CAZyme
Location: 11023 - 12216 (+)
Type: CAZyme
Location: 11023 - 12216 (+)
Gene ID: k141_27958_10
Type: CAZyme
Location: 12222 - 13112 (+)
Type: CAZyme
Location: 12222 - 13112 (+)
Gene ID: k141_27958_11
Type: TC
Location: 13177 - 14394 (+)
Type: TC
Location: 13177 - 14394 (+)
Gene ID: k141_27958_12
Type: TC
Location: 14404 - 15984 (+)
Type: TC
Location: 14404 - 15984 (+)
Gene ID: k141_27958_13
Type: TC
Location: 15968 - 17503 (+)
Type: TC
Location: 15968 - 17503 (+)
Gene ID: k141_27958_14
Type: TC
Location: 17500 - 17940 (+)
Type: TC
Location: 17500 - 17940 (+)
Gene ID: k141_27958_15
Type: TC
Location: 17933 - 20305 (+)
Type: TC
Location: 17933 - 20305 (+)
Gene ID: k141_27958_16
Type: CAZyme
Location: 20317 - 21828 (+)
Type: CAZyme
Location: 20317 - 21828 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.